Browsing by Subject "Surfactant"
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Item Open Access Development of biointegrated electrospun nanofibers for environmental applications(2016-08) Sarıoğlu, Ömer FarukElectrospinning is an easy and economical production technique to produce nanofiber/nanofibrous webs from different polymers, polymer mixtures, inorganic materials, supramolecular structures and composite materials. These nanofibers have unique physical/chemical properties due to their large surface areas and highly nanoporous structures. Since these nanofibers have superior properties, various functions and can be modified by physical/chemical methods, they have a great potential to be applied in membrane/filter applications. Bioremediation is a commonly used technique for removal of water contaminants, and different kinds of bacteria have been used for bioremediation of water systems. Use of biointegrated hybrid materials is an alternative approach for bioremediation, and this may provide higher efficiency, ease of application and reusability. As a carrier system, electrospun nanofibers are suitable materials for integration of bacteria, since electrospinning can allow production of nano/micro scale composites with tunable physical/chemical properties. In this thesis, it was aimed to integrate bacteria that have bioremediation capability with electrospun nanofibers by using immobilization/encapsulation techniques and test the potential of these biocomposites for treatment of contaminated water systems. The integration of bacteria that can remediate ammonium, heavy metal, textile dye and surfactant with electrospun nanofibers was achieved by two different approaches. In the first approach, bacterial cells were physically immobilized on cellulose acetate (CA), polysulfone (PSU), polystyrene (PS), polycaprolactone (PCL) and polylactic acid (PLA) electrospun nanofibers. In order to observe effects of nanofiber/nanofibrous web morphology and arrangements on the immobilization of bacteria, some of these nanofibers were produced as porous, parallelly arranged, and with different diameters. In the second approach, by using polyvinyl alcohol (PVA) and polyethylene oxide (PEO) polymers, simultaneous encapsulation of bacteria in nanofiber structures was provided. Afterwards, all these different kinds of biocomposites were tested for their remediation potential in accordance with the intended use of the integrated bacteria.Item Open Access Local delivery of doxorubicin through supramolecular peptide amphiphile nanofiber gels(Royal Society of Chemistry, 2017) Cinar, G.; Ozdemir, A.; Hamsici, S.; Gunay, G.; Dana, A.; Tekinay, A. B.; Güler, Mustafa O.Peptide amphiphiles (PAs) self-assemble into supramolecular nanofiber gels that provide a suitable environment for encapsulation of both hydrophobic and hydrophilic molecules. The PA gels have significant advantages for controlled delivery applications due to their high capacity to retain water, biocompatibility, and biodegradability. In this study, we demonstrate injectable supramolecular PA nanofiber gels for drug delivery applications. Doxorubicin (Dox), as a widely used chemotherapeutic drug for breast cancer treatment, was encapsulated within the PA gels prepared at different concentrations. Physical and chemical properties of the gels were characterized, and slow release of the Dox molecules through the supramolecular PA nanofiber gels was studied. In addition, the diffusion constants of the drug molecules within the PA nanofiber gels were estimated using fluorescence recovery after the photobleaching (FRAP) method. The PA nanofiber gels did not show any cytotoxicity and the encapsulation strategy enhanced the activity of drug molecules on cellular viability through prolonged release compared to direct administration under in vitro conditions. Moreover, the local in vivo injection of the Dox encapsulated PA nanofiber gels (Dox/PA) to the tumor site demonstrated the lowest tumor growth rate compared to the direct Dox injection and increased the apoptotic cells within the tumor tissue for local drug release through the PA nanofiber gels under in vivo conditions.Item Open Access Production and structural characterization of biosurfactant produced by newly isolated staphylococcus xylosus STF1 from petroleum contaminated soil(Elsevier BV, 2015) Keskin, N. O. S.; Han, D.; Ozkan A.D.; Angun, P.; Umu, O. C. O.; Tekinay, T.Petroleum-contaminated soil was used to isolate and characterize biosurfactant producing bacteria. The strain could produce higher amount of biosurfactant in medium supplemented with motor oil as sole source of carbon and energy. A new biosurfactant producing bacterium, designated as Staphylococcus xylosus STF1 based on morphological, physiological, biochemical tests and 16S rRNA gene sequencing. The isolated bacterium was first screened for the ability to produce biosurfactant. Partial sequence of STF1 strain of 16S rDNA gene was highly similar to those of various members of the family Staphylococcaceae. Biochemical characterizations including FT-IR, Raman spectroscopy and Mass spectroscopy studies suggested the biosurfactant to be lipopeptide. Study also confirmed that the cell free supernatant exhibited high emulsifying activity against the different hydrocarbons. Moreover, the partially purified biosurfactant exhibited antimicrobial activity by inhibiting the growth of several bacterial species. The strain could be a potential candidate for the production of polypeptide biosurfactant which could be useful in a variety of biotechnological and industrial processes, particularly in the food and oil industry. © 2015 Elsevier B.V.Item Open Access Sorption of phenol and radioactive cesium onto surfactant modified insolubilized humic acid(2010) Celebi, O.; Erten, H. N.In this study, the sorption behavior of two important contaminants, phenol and radioactive cesium (137Cs), onto surfactant modified insolubilized humic acid (SMIA) were investigated as a function of time, sorbate concentration utilizing the radiotracer method and UV-Vis spectroscopy. Phenol sorption process was well described by both Freundlich and Tempkin type isotherms, and cesium sorption was described by Freundlich and Dubinin-Radushkevich isotherms. It was found that SMIA adsorbs both cations and phenolic substances. Kinetic studies indicated that adsorption behavior of phenol obey the pseudo second order rate law. FTIR spectroscopic technique was used to understand the structural changes during modification process with surfactants.Item Open Access Spatial organization of functional groups on bioactive supramolecular glycopeptide nanofibers for differentiation of mesenchymal stem cells (MSCs) to brown adipogenesis(American Chemical Society, 2016-12) Caliskan, O. S.; Sardan, Ekiz M.; Tekinay, A. B.; Güler, Mustafa O.Spatial organization of bioactive moieties in biological materials has significant impact on the function and efficiency of these systems. Here, we demonstrate the effect of spatial organization of functional groups including carboxylate, amine, and glucose functionalities by using self-assembled peptide amphiphile (PA) nanofibers as a bioactive scaffold. We show that presentation of bioactive groups on glycopeptide nanofibers affects mesenchymal stem cells (MSCs) in a distinct manner by means of adhesion, proliferation, and differentiation. Strikingly, when the glutamic acid is present in the glycopeptide backbone, the PA nanofibers specifically induced differentiation of MSCs into brown adipocytes in the absence of any differentiation medium as shown by lipid droplet accumulation and adipogenic gene marker expression analyses. This effect was not evident in the other glycopeptide nanofibers, which displayed the same functional groups but with different spatial organization. Brown adipocytes are attractive targets for obesity treatment and are found in trace amounts in adults, which also makes this specific glycopeptide nanofiber system an attractive tool to study molecular pathways of brown adipocyte formation.