Assessment of Parkinson's disease severity from videos using deep architecture

buir.contributor.authorDibeklioğlu, Hamdi
buir.contributor.orcidDibeklioğlu, Hamdi|0000-0003-0851-7808
dc.contributor.authorYin, Z.
dc.contributor.authorGeraedts, V. J.
dc.contributor.authorWang, Z.
dc.contributor.authorContarino, M. F.
dc.contributor.authorDibeklioğlu, Hamdi
dc.contributor.authorGemert, J. V.
dc.date.accessioned2022-01-25T10:06:32Z
dc.date.available2022-01-25T10:06:32Z
dc.date.issued2021-07-26
dc.departmentDepartment of Computer Engineeringen_US
dc.description.abstractParkinson's disease (PD) diagnosis is based on clinical criteria, i.e., bradykinesia, rest tremor, rigidity, etc. Assessment of the severity of PD symptoms with clinical rating scales, however, is subject to inter-rater variability. In this paper, we propose a deep learning based automatic PD diagnosis method using videos to assist the diagnosis in clinical practices. We deploy a 3D Convolutional Neural Network (CNN) as the baseline approach for the PD severity classification and show the effectiveness. Due to the lack of data in clinical field, we explore the possibility of transfer learning from non-medical dataset and show that PD severity classification can benefit from it. To bridge the domain discrepancy between medical and non-medical datasets, we let the network focus more on the subtle temporal visual cues, i.e., the frequency of tremors, by designing a Temporal Self-Attention (TSA) mechanism. Seven tasks from the Movement Disorders Society - Unified PD rating scale (MDS-UPDRS) part III are investigated, which reveal the symptoms of bradykinesia and postural tremors. Furthermore, we propose a multi-domain learning method to predict the patient-level PD severity through task-assembling. We show the effectiveness of TSA and task-assembling method on our PD video dataset empirically. We achieve the best MCC of 0.55 on binary task-level and 0.39 on three-class patient-level classification.en_US
dc.description.provenanceSubmitted by Evrim Ergin (eergin@bilkent.edu.tr) on 2022-01-25T10:06:32Z No. of bitstreams: 1 Assessment_of_Parkinson's_disease_severity_from_videos_using_deep_architecture.pdf: 1428655 bytes, checksum: 0f4c2306780e83b2b10dcb9799e4a0e0 (MD5)en
dc.description.provenanceMade available in DSpace on 2022-01-25T10:06:32Z (GMT). No. of bitstreams: 1 Assessment_of_Parkinson's_disease_severity_from_videos_using_deep_architecture.pdf: 1428655 bytes, checksum: 0f4c2306780e83b2b10dcb9799e4a0e0 (MD5) Previous issue date: 2021-07-26en
dc.identifier.doi10.1109/JBHI.2021.3099816en_US
dc.identifier.eissn2168-2208
dc.identifier.issn2168-2194
dc.identifier.urihttp://hdl.handle.net/11693/76775
dc.language.isoEnglishen_US
dc.publisherIEEEen_US
dc.relation.isversionofhttps://doi.org/10.1109/JBHI.2021.3099816en_US
dc.source.titleIEEE Journal of Biomedical and Health Informaticsen_US
dc.subjectParkinson’s disease (PD)en_US
dc.subjectSeverity classificationen_US
dc.subjectTransfer learningen_US
dc.subjectDeep learningen_US
dc.subjectSelf-attentionen_US
dc.subjectMulti-domain learningen_US
dc.titleAssessment of Parkinson's disease severity from videos using deep architectureen_US
dc.typeArticleen_US

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