FD-Net: an unsupervised deep forward-distortion model forsusceptibility artifact correction in EPI

buir.contributor.authorZaid Alkilani, Abdallah
buir.contributor.authorÇukur, Tolga
buir.contributor.authorSarıtaş, Emine Ülkü
buir.contributor.orcidZaid Alkilani, Abdallah|0000-0001-8409-8444
buir.contributor.orcidÇukur, Tolga|0000-0002-2296-851X
buir.contributor.orcidSarıtaş, Emine Ülkü|0000-0001-8551-1077
dc.citation.epage296en_US
dc.citation.issueNumber91
dc.citation.spage280
dc.citation.volumeNumber2024
dc.contributor.authorZaid Alkilani, Abdallah
dc.contributor.authorÇukur, Tolga
dc.contributor.authorSarıtaş, Emine Ülkü
dc.date.accessioned2024-03-17T06:49:21Z
dc.date.available2024-03-17T06:49:21Z
dc.date.issued2023-08-15
dc.departmentDepartment of Electrical and Electronics Engineering
dc.departmentNational Magnetic Resonance Research Center (UMRAM)
dc.departmentAysel Sabuncu Brain Research Center (BAM)
dc.description.abstractPurposeTo introduce an unsupervised deep-learning method for fast and effective correction of susceptibility artifacts in reversed phase-encode (PE) image pairs acquired with echo planar imaging (EPI).MethodsRecent learning-based correction approaches in EPI estimate a displacement field, unwarp the reversed-PE image pair with the estimated field, and average the unwarped pair to yield a corrected image. Unsupervised learning in these unwarping-based methods is commonly attained via a similarity constraint between the unwarped images in reversed-PE directions, neglecting consistency to the acquired EPI images. This work introduces a novel unsupervised deep Forward-Distortion Network (FD-Net) that predicts both the susceptibility-induced displacement field and the underlying anatomically correct image. Unlike previous methods, FD-Net enforces the forward-distortions of the correct image in both PE directions to be consistent with the acquired reversed-PE image pair. FD-Net further leverages a multiresolution architecture to maintain high local and global performance.ResultsFD-Net performs competitively with a gold-standard reference method (TOPUP) in image quality, while enabling a leap in computational efficiency. Furthermore, FD-Net outperforms recent unwarping-based methods for unsupervised correction in terms of both image and field quality.ConclusionThe unsupervised FD-Net method introduces a deep forward-distortion approach to enable fast, high-fidelity correction of susceptibility artifacts in EPI by maintaining consistency to measured data. Therefore, it holds great promise for improving the anatomical accuracy of EPI imaging.
dc.description.provenanceMade available in DSpace on 2024-03-17T06:49:21Z (GMT). No. of bitstreams: 1 FD-Net_An_unsupervised_deep_forward-distortion_model_for_susceptibility_artifact_correction_in_EPI.pdf: 2734994 bytes, checksum: bbc4c6e79e0fa5dfc8716b1655bf5e05 (MD5) Previous issue date: 2023-08-15en
dc.identifier.doi10.1002/mrm.29851
dc.identifier.eissn1522-2594
dc.identifier.issn0740-3194
dc.identifier.urihttps://hdl.handle.net/11693/114830
dc.language.isoen_US
dc.publisherWILEY
dc.relation.isversionofhttps://doi.org/10.1002/mrm.29851
dc.rightsCC BY-NC-ND 4.0 DEED (Attribution-NonCommercial-NoDerivs 4.0 International)
dc.rights.urihttps://creativecommons.org/licenses/by-nc-nd/4.0/
dc.source.titleMagnetic Resonance in Medicine
dc.subjectDeep learning
dc.subjectEcho planar imaging
dc.subjectReversed phase-encoding
dc.subjectSusceptibility artifacts
dc.subjectUnsupervised learning
dc.titleFD-Net: an unsupervised deep forward-distortion model forsusceptibility artifact correction in EPI
dc.typeArticle

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