FD-Net: an unsupervised deep forward-distortion model forsusceptibility artifact correction in EPI
buir.contributor.author | Zaid Alkilani, Abdallah | |
buir.contributor.author | Çukur, Tolga | |
buir.contributor.author | Sarıtaş, Emine Ülkü | |
buir.contributor.orcid | Zaid Alkilani, Abdallah|0000-0001-8409-8444 | |
buir.contributor.orcid | Çukur, Tolga|0000-0002-2296-851X | |
buir.contributor.orcid | Sarıtaş, Emine Ülkü|0000-0001-8551-1077 | |
dc.citation.epage | 296 | en_US |
dc.citation.issueNumber | 91 | |
dc.citation.spage | 280 | |
dc.citation.volumeNumber | 2024 | |
dc.contributor.author | Zaid Alkilani, Abdallah | |
dc.contributor.author | Çukur, Tolga | |
dc.contributor.author | Sarıtaş, Emine Ülkü | |
dc.date.accessioned | 2024-03-17T06:49:21Z | |
dc.date.available | 2024-03-17T06:49:21Z | |
dc.date.issued | 2023-08-15 | |
dc.department | Department of Electrical and Electronics Engineering | |
dc.department | National Magnetic Resonance Research Center (UMRAM) | |
dc.department | Aysel Sabuncu Brain Research Center (BAM) | |
dc.description.abstract | PurposeTo introduce an unsupervised deep-learning method for fast and effective correction of susceptibility artifacts in reversed phase-encode (PE) image pairs acquired with echo planar imaging (EPI).MethodsRecent learning-based correction approaches in EPI estimate a displacement field, unwarp the reversed-PE image pair with the estimated field, and average the unwarped pair to yield a corrected image. Unsupervised learning in these unwarping-based methods is commonly attained via a similarity constraint between the unwarped images in reversed-PE directions, neglecting consistency to the acquired EPI images. This work introduces a novel unsupervised deep Forward-Distortion Network (FD-Net) that predicts both the susceptibility-induced displacement field and the underlying anatomically correct image. Unlike previous methods, FD-Net enforces the forward-distortions of the correct image in both PE directions to be consistent with the acquired reversed-PE image pair. FD-Net further leverages a multiresolution architecture to maintain high local and global performance.ResultsFD-Net performs competitively with a gold-standard reference method (TOPUP) in image quality, while enabling a leap in computational efficiency. Furthermore, FD-Net outperforms recent unwarping-based methods for unsupervised correction in terms of both image and field quality.ConclusionThe unsupervised FD-Net method introduces a deep forward-distortion approach to enable fast, high-fidelity correction of susceptibility artifacts in EPI by maintaining consistency to measured data. Therefore, it holds great promise for improving the anatomical accuracy of EPI imaging. | |
dc.description.provenance | Made available in DSpace on 2024-03-17T06:49:21Z (GMT). No. of bitstreams: 1 FD-Net_An_unsupervised_deep_forward-distortion_model_for_susceptibility_artifact_correction_in_EPI.pdf: 2734994 bytes, checksum: bbc4c6e79e0fa5dfc8716b1655bf5e05 (MD5) Previous issue date: 2023-08-15 | en |
dc.identifier.doi | 10.1002/mrm.29851 | |
dc.identifier.eissn | 1522-2594 | |
dc.identifier.issn | 0740-3194 | |
dc.identifier.uri | https://hdl.handle.net/11693/114830 | |
dc.language.iso | en_US | |
dc.publisher | WILEY | |
dc.relation.isversionof | https://doi.org/10.1002/mrm.29851 | |
dc.rights | CC BY-NC-ND 4.0 DEED (Attribution-NonCommercial-NoDerivs 4.0 International) | |
dc.rights.uri | https://creativecommons.org/licenses/by-nc-nd/4.0/ | |
dc.source.title | Magnetic Resonance in Medicine | |
dc.subject | Deep learning | |
dc.subject | Echo planar imaging | |
dc.subject | Reversed phase-encoding | |
dc.subject | Susceptibility artifacts | |
dc.subject | Unsupervised learning | |
dc.title | FD-Net: an unsupervised deep forward-distortion model forsusceptibility artifact correction in EPI | |
dc.type | Article |
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