Clustering fMRI data with a robust unsupervised learning algorithm for neuroscience data mining

Limited Access
This item is unavailable until:
2019-10-01

Date

2018

Authors

Aljobouri, H. K.
Jaber, H. A.
Koçak, O. M.
Algin, O.
Çankaya, I.

Editor(s)

Advisor

Supervisor

Co-Advisor

Co-Supervisor

Instructor

Source Title

Journal of Neuroscience Methods

Print ISSN

0165-0270

Electronic ISSN

Publisher

Elsevier

Volume

299

Issue

Pages

45 - 54

Language

English

Journal Title

Journal ISSN

Volume Title

Series

Abstract

Background: Clustering approaches used in functional magnetic resonance imaging (fMRI) research use brain activity to divide the brain into various parcels with some degree of homogeneous characteristics, but choosing the appropriate clustering algorithms remains a problem. New method: A novel application of the robust unsupervised learning approach is proposed in the current study. Robust growing neural gas (RGNG) algorithm was fed into fMRI data and compared with growing neural gas (GNG) algorithm, which has not been used for this purpose or any other medical application. Learning algorithms proposed in the current study are fed with real and free auditory fMRI datasets. Results: The fMRI result obtained by running RGNG was within the expected outcome and is similar to those found with the hypothesis method in detecting active areas within the expected auditory cortices. Comparison with existing method(s): The fMRI application of the presented RGNG approach is clearly superior to other approaches in terms of its insensitivity to different initializations and the presence of outliers, as well as its ability to determine the actual number of clusters successfully, as indicated by its performance measured by minimum description length (MDL) and receiver operating characteristic (ROC) analysis. Conclusions: The RGNG can detect the active zones in the brain, analyze brain function, and determine the optimal number of underlying clusters in fMRI datasets. This algorithm can define the positions of the center of an output cluster corresponding to the minimal MDL value.

Course

Other identifiers

Book Title

Citation