SNR weighting for shear wave speed reconstruction in tomoelastography

buir.contributor.authorArıyürek, Cemre
buir.contributor.authorTaşdelen, Bilal
buir.contributor.authorİder, Yusuf Ziya
buir.contributor.authorAtalar, Ergin
buir.contributor.orcidArıyürek, Cemre|0000-0002-1691-7097
buir.contributor.orcidTaşdelen, Bilal|0000-0001-6462-3651
buir.contributor.orcidİder, Yusuf Ziya|0000-0002-1961-6804
buir.contributor.orcidAtalar, Ergin|0000-0002-6874-6103
dc.citation.epage18en_US
dc.citation.issueNumber1en_US
dc.citation.spage1en_US
dc.citation.volumeNumber34en_US
dc.contributor.authorArıyürek, Cemre
dc.contributor.authorTaşdelen, Bilal
dc.contributor.authorİder, Yusuf Ziya
dc.contributor.authorAtalar, Ergin
dc.date.accessioned2022-03-01T08:05:38Z
dc.date.available2022-03-01T08:05:38Z
dc.date.issued2020-08-06
dc.departmentDepartment of Electrical and Electronics Engineeringen_US
dc.departmentNational Magnetic Resonance Research Center (UMRAM)en_US
dc.description.abstractIn tomoelastography, to achieve a final wave speed map by combining reconstructions obtained from all spatial directions and excitation frequencies, the use of weights is inevitable. Here, a new weighting scheme, which maximizes the signal-to-noise ratio (SNR) of the final wave speed map, has been proposed. To maximize the SNR of the final wave speed map, the use of squares of estimated SNR values of reconstructed individual maps has been proposed. Therefore, derivations of the SNR of the reconstructed wave speed maps have become necessary. Considering the noise on the complex MRI signal, the SNR of the reconstructed wave speed map was formulated by an analytical approach assuming a high SNR, and the results were verified using Monte Carlo simulations (MCSs). It has been assumed that the noise remains approximately Gaussian when the image SNR is high enough, despite the nonlinear operations in tomoelastography inversion. Hence, the SNR threshold was determined by comparing the SNR computed by MCSs and analytical approximations. The weighting scheme was evaluated for accuracy, spatial resolution and SNR performances on simulated phantoms. MR elastography (MRE) experiments on two different phantoms were conducted. Wave speed maps were generated for simulated 3D human abdomen MRE data and experimental human abdomen MRE data. The simulation results demonstrated that the SNR-weighted inversion improved the SNR performance of the wave speed map by a factor of two compared to the performance of the original (i.e., amplitude-weighted) reconstruction. In the case of a low SNR, no bias occurred in the wave speed map when SNR weighting was used, whereas 10% bias occurred when the original weighting (i.e., amplitude weighting) was used. Thus, while not altering the accuracy or spatial resolution of the wave speed map with the proposed weighting method, the SNR of the wave speed map has been significantly improved.en_US
dc.description.provenanceSubmitted by Esma Aytürk (esma.babayigit@bilkent.edu.tr) on 2022-03-01T08:05:38Z No. of bitstreams: 1 SNR_Weighting_for_Shear_Wave_Speed_Reconstruction_in_Tomoelastography.pdf: 3419870 bytes, checksum: 701e2a137e9f28bbea8e48755320bd67 (MD5)en
dc.description.provenanceMade available in DSpace on 2022-03-01T08:05:38Z (GMT). No. of bitstreams: 1 SNR_Weighting_for_Shear_Wave_Speed_Reconstruction_in_Tomoelastography.pdf: 3419870 bytes, checksum: 701e2a137e9f28bbea8e48755320bd67 (MD5) Previous issue date: 2020-08-06en
dc.embargo.release2021-08-06
dc.identifier.doi10.1002/nbm.4413en_US
dc.identifier.eissn1099-1492
dc.identifier.urihttp://hdl.handle.net/11693/77638
dc.language.isoEnglishen_US
dc.publisherJohn Wiley & Sons Ltd.en_US
dc.relation.isversionofhttps://doi.org/10.1002/nbm.4413en_US
dc.source.titleNMR in Biomedicineen_US
dc.subjectFEM simulationsen_US
dc.subjectMonte Carlo simulationsen_US
dc.subjectMultifrequency magnetic resonance elastographyen_US
dc.subjectShear wave speeden_US
dc.subjectSNRen_US
dc.titleSNR weighting for shear wave speed reconstruction in tomoelastographyen_US
dc.typeArticleen_US

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