Browsing by Subject "Reactive oxygen species"

Now showing 1 - 5 of 5

Open Access
Antioxidant response of Chlamydomonas reinhardtii grown under different element regimes
(Blackwell Publishing, 2015) Çakmak, Z. E.; Ölmez, T. T.; Çakmak, T.; Menemen, Y.; Tekinay, T.
Nutrient stress is one of the most favorable ways of increasing neutral lipid and high value-added output production by microalgae. However, little is known about the level of the oxidative damage caused by nutrient stress for obtaining an optimal stress level for maximum production of specific molecules. In this study, the antioxidant response of Chlamydomonas reinhardtii grown under element deprivation (nitrogen, sulfur, phosphorus and magnesium) and supplementation (nitrogen and zinc) was investigated. All element regimes caused a decrease in growth, which was most pronounced under N deprivation. Element deprivation and Zn supplementation caused significant increases in H2O2 and lipid peroxidation levels of C.reinhardtii. Decrease in total chlorophyll level was followed by an increase of total carotenoid levels in C.reinhardtii under N and S deprivation while both increased under N supplementation. Confocal imaging of live cells revealed dramatic changes of cell shape and production of neutral lipid bodies accompanied by a decrease of chlorophyll clusters. Antioxidant capacity of cells decreased under N, S and P deprivation while it increased under N and Zn supplementation. Fluctuation of antioxidant enzyme activities in C.reinhardtii grown under different element regimes refers to different metabolic sources of reactive oxygen species production triggered by a specific element absence or overabundance. © 2015 Japanese Society of Phycology.
Open Access
Imaging of intracellular singlet oxygen with bright BODIPY dyes
(Elsevier Ltd, 2021-04) Kaya, S.; Kwon, N.; Kim, G.; Bila, Jose Luis; İsmaiel, Yahya A.; Yoon, J.; Seven, Özlem; Akkaya, E.
Singlet oxygen is a cytotoxic reactive species which is involved in the photodynamic therapy of cancer. It is also known to be produced endogenously in most eukaryotic cells and implicated in many biochemical processes, including apoptotic response. We now report that Bodipy based fluorescent dyes with singlet oxygen reactive modules, signal the intracellular generation of singlet oxygen through photosensitization. We believe long wavelength probes of singlet oxygen, based on this approach will be highly valuable.
Open Access
Photosensitization and controlled photosensitization with BODIPY dyes
(Elsevier, 2017) Türksoy, Abdurrahman; Yıldız, Deniz; Akkaya, Engin U.
Highly versatile BODIPY dyes proved themselves to be very useful as photosensitizers. These dyes can be derivatized to absorb essentially anywhere in the visible the near IR region of the spectrum. As a result of their diverse reactivity, singlet oxygen generation efficiency can be modulated very precisely, leading to a number of selective photosensitizers for photodynamic therapy. Among the biologically relevant modulators, glutathione concentration and pH received particular attention. In this review, we highlight modulatable BODIPY-based photodynamic photosensitizers, and various synthetically useful chemical reactions triggered by singlet oxygen and other reactive oxygen species generated by BODIPY-based photosensitizers.
Open Access
Rational synthesis of Na and S co-catalyst TiO2-based nanofibers: presence of surface-layered TiS3 shell grains and sulfur-induced defects for efficient visible-light driven photocatalysis
(Royal Society of Chemistry, 2017) Ranjith, K. S.; Uyar, Tamer
Surface-modified TiO2 nanofibers (NFs) with tunable visible-light photoactive catalysts were synthesised through electrospinning, followed by a sulfidation process. The utilization of sodium-based sulfidation precursors effectively led to the diffusion and integration of sulfur impurities into TiO2, modifying its band function. The optical band function of the sulfur-modified TiO2 NFs can be easily manipulated from 3.17 eV to 2.28 eV through surface modification, due to the creation of oxygen vacancies through the sulfidation process. Sulfidating TiO2 NFs introduces Ti-S-based nanograins and oxygen vacancies on the surface that favor the TiO2-TiS3 core-shell interface. These defect states extend the photocatalytic activity of the TiO2 NFs under visible irradiation and improve effective carrier separation and the production of reactive oxygen species. The surface oxygen vacancies and the Ti-S-based surface nanograins serve as charge traps and act as adsorption sites, improving the carrier mobility and avoiding charge recombination. The diffused S-modified TiO2 NFs exhibit a degradation rate of 0.0365 cm-1 for RhB dye solution, which is 4.8 times higher than that of pristine TiO2 NFs under visible irradiation. By benefiting from the sulfur states and oxygen vacancies, with a narrowed band gap of 2.3 eV, these nanofibers serve as suitable localized states for effective carrier separation.
Open Access
The role of IRE1 in metaflammation and atherosclerosis
(2017-05) Tufanlı, Özlem
Chronic metabolic overloading of anabolic and catabolic organelles such as the endoplasmic reticulum (ER) and mitochondria is a major cause of inflammation in obesity. ER serves as a critical metabolic center for protein, lipid and calcium metabolism. ER’s vital functions are maintained by a conserved, adaptive stress response known as the Unfolded Protein Response (UPR), which strives to re-establish homeostasis. Irremediable ER stress, however, can push the UPR to initiate proinflammatory and pro-apoptotic signaling. UPR activation is seen in all stages of atherosclerotic plaque formation and ER stress is causally associated with atherosclerosis. A profound interest in therapeutically limiting ER stress in a variety of human diseases has driven the discovery of small molecules that can modulate specific UPR signaling arms. These UPR modulators can also become tools to understand the distinct contribution of UPR branches to atherogenesis. In my studies I utilized a specific inhibitor for Inositol-requiring enzyme-1 (IRE1), a dual kinase and endoribonuclease (RNase) in the UPR, to define IRE1’s RNA substrates in macrophages. Using RNA sequencing, I discovered that IRE1’s RNase activity regulates many pro-atherogenic and pro-inflammatory genes in macrophages. The outcome of my studies provides compelling evidence that IRE1, through its target XBP1, regulates the inflammatory response to lipid excess. The data shows that specific inhibitors of IRE1’s RNase activity can uncouple lipid-induced ER stress from immune response in both mouse and human macrophages by blocking mitochondrial reactive oxygen species production and NLRP3 inflammasome activation. Furthermore, administrating two small molecule inhibitors of IRE1’s RNase activity to hypercholestrolemic ApoE deficient (ApoE-/-) mice led to profound suppression of pro-atherogenic cytokine levels in the circulation and blunted T helper-1 type immune response, thus alleviating atherosclerosis. These results demonstrate that therapeutic fine-tuning of IRE1’s RNase activity with small molecule inhibitors could be developed further for atherosclerosis.