Browsing by Subject "Mass transfer"

Now showing 1 - 4 of 4

Open Access
Effect of oxygen supply on metabolism of immobilized and suspended Escherichia coli
(John Wiley & Sons Inc, New York, NY, United States, 1996) Inanç, E.; Miller J. E.; DiBiasio, D.
The effect of reduced oxygen supply on the production of a recombinant protein (plasmid-encoded β-galactosidase) was investigated in Escherichia coli. A novel modified bubble tank reactor was used to provide a direct comparison between immobilized and suspended cells in identical environments except for the immobilization matrix. Decreased oxygen supply led to increased β-galactosidase synthesis by both immobilized and suspended cells. Immobilized cells produced similar amounts of β-galactosidase as the suspended cells. Lactose consumption and acetate production, on a per cell basis, were significantly higher in immobilized cells, suggesting that immobilized cells utilized fermentative metabolism. However, a transport analysis of the immobilized cell system showed that immobilized cells were not subject to either external or internal mass transfer gradients.The effect of reduced oxygen supply on the production of a recombinant protein (plasmid-encoded β-galactosidase) was investigated in Escherichia coli. A novel modified bubble tank reactor was used to provide a direct comparison between immobilized and suspended cells in identical environments except for the immobilization matrix. Decreased oxygen supply led to increased β-galactosidase synthesis by both immobilized and suspended cells. Immobilized cells produced similar amounts of β-galactosidase as the suspended cells. Lactose consumption and acetate production, on a per cell basis, were significantly higher in immobilized cells, suggesting that immobilized cells utilized fermentative metabolism. However, a transport analysis of the immobilized cell system showed that immobilized cells were not subject to either external or internal mass transfer gradients.
Open Access
Semi-analytical source method for reaction-diffusion problems
(American Society of Mechanical Engineers (ASME), 2018) Cole, K. D.; Çetin, Barbaros; Demirel, Y.
Estimation of thermal properties, diffusion properties, or chemical-reaction rates from transient data requires that a model is available that is physically meaningful and suitably precise. The model must also produce numerical values rapidly enough to accommodate iterative regression, inverse methods, or other estimation procedures during which the model is evaluated again and again. Applications that motivate the present work include process control of microreactors, measurement of diffusion properties in microfuel cells, and measurement of reaction kinetics in biological systems. This study introduces a solution method for nonisothermal reaction-diffusion (RD) problems that provides numerical results at high precision and low computation time, especially for calculations of a repetitive nature. Here, the coupled heat and mass balance equations are solved by treating the coupling terms as source terms, so that the solution for concentration and temperature may be cast as integral equations using Green’s functions (GF). This new method requires far fewer discretization elements in space and time than fully numeric methods at comparable accuracy. The method is validated by comparison with a benchmark heat transfer solution and a commercial code. Results are presented for a first-order chemical reaction that represents synthesis of vinyl chloride. Copyright
Open Access
Simulation of an integrated microfluidic device for bioparticle wash, separation and concentration
(American Society of Mechanical Engineers (ASME), 2013) Çetin, Barbaros; Büyükkoçak, S.; Zeinali, Soheila; Özer, B.
Washing, separation and concentration of bioparticles are key operations for many biological and chemical analyses. In this study, the simulation of an integrated microfluidic device is studied. The proposed device has the capability to wash the bioparticles (transferring the bioparticles from one buffer solution to another), to separate the particles based on their dielectric properties and to concentrate the bioparticles. Washing and concentration of bioparticles are performed by acoustophoresis and the separation is performed by dielectrophoresis. For simulating the flow within the microchannel, a computational fluid dynamics model using COMSOL Multiphysics software is implemented. In order to simulate the particle trajectories under ultrasonic and electric field, point-particle assumption is chosen using MATLAB software. To account for the size variation of the bioparticles, particles with normal size distributions are used in-side the microchannel. The effect of the key design parameters such as flow rate, applied voltage etc. on the performance of the device is discussed. Copyright © 2013 by ASME.
Open Access
Spiral microfluidics device for continuous flow PCR
(ASME, 2013) Salemmilani, Reza; Çetin, Barbaros
Polymerase-chain-Reaction (PCR) is a thermal cycling (repeated heating and cooling of PCR solution) process for DNA amplification. PCR is the key ingredient in many biomedical applications. One key feature for the success of the PCR is to control the temperature of the solution precisely at the desired temperature levels required for the PCR in a cyclic manner. Microfluidics offers a great advantage over conventional techniques since minute amounts of PCR solution can be heated and cooled with a high rate in a controlled manner. In this study, a microfluidic platform has been proposed for continuous-flow PCR. The microfluidic device consists of a spiral channel on a glass wafer with integrated chromium microheaters. Sub-micron thick microheaters are deposited beneath the micro-channels to facilitate localized heating. The microfluidic device is modeled using COMSOL MultiphysicsR . The fabrication procedure of the device is also discussed and future research directions are addressed. With its compact design, the proposed system can easily be coupled with an integrated microfluidic device to be used in biomedical applications. Copyright © 2013 by ASME.