Browsing by Subject "High costs"

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Open Access
Differential effects of nitrogen and sulfur deprivation on growth and biodiesel feedstock production of Chlamydomonas reinhardtii
(2012) Cakmak, T.; Angun P.; Demiray, Y.E.; Ozkan, A.D.; Elibol, Z.; Tekinay, T.
Biodiesel production from microalgae is a promising approach for energy production; however, high cost of its process limits the use of microalgal biodiesel. Increasing the levels of triacylglycerol (TAG) levels, which is used as a biodiesel feedstock, in microalgae has been achieved mainly by nitrogen starvation. In this study, we compared effects of sulfur (S) and nitrogen (N) starvation on TAG accumulation and related parameters in wild-type Chlamydomonas reinhardtii CC-124 mt(-) and CC-125 mt(+) strains. Cell division was interrupted, protein and chlorophyll levels rapidly declined while cell volume, total neutral lipid, carotenoid, and carbohydrate content increased in response to nutrient starvation. Cytosolic lipid droplets in microalgae under nutrient starvation were monitored by three-dimensional confocal laser imaging of live cells. Infrared spectroscopy results showed that relative TAG, oligosaccharide and polysaccharide levels increased rapidly in response to nutrient starvation, especially S starvation. Both strains exhibited similar levels of regulation responses under mineral deficiency, however, the degree of their responses were significantly different, which emphasizes the importance of mating type on the physiological response of algae. Neutral lipid, TAG, and carbohydrate levels reached their peak values following 4 days of N or S starvation. Therefore, 4 days of N or S starvation provides an excellent way of increasing TAG content. Although increase in these parameters was followed by a subsequent decline in N-starved strains after 4 days, this decline was not observed in S-starved ones, which shows that S starvation is a better way of increasing TAG production of C. reinhardtii than N starvation. © 2012 Wiley Periodicals, Inc.
Open Access
Using data compression for increasing memory system utilization
(Institute of Electrical and Electronics Engineers, 2009-06) Ozturk, O.; Kandemir, M.; Irwin, M. J.
The memory system presents one of the critical challenges in embedded system design and optimization. This is mainly due to the ever-increasing code complexity of embedded applications and the exponential increase seen in the amount of data they manipulate. The memory bottleneck is even more important for multiprocessor-system-on-a-chip (MPSoC) architectures due to the high cost of off-chip memory accesses in terms of both energy and performance. As a result, reducing the memory-space occupancy of embedded applications is very important and will be even more important in the next decade. While it is true that the on-chip memory capacity of embedded systems is continuously increasing, the increases in the complexity of embedded applications and the sizes of the data sets they process are far greater. Motivated by this observation, this paper presents and evaluates a compiler-driven approach to data compression for reducing memory-space occupancy. Our goal is to study how automated compiler support can help in deciding the set of data elements to compress/ decompress and the points during execution at which these compressions/decompressions should be performed. We first study this problem in the context of single-core systems and then extend it to MPSoCs where we schedule compressions and decompressions intelligently such that they do not conflict with application execution as much as possible. Particularly, in MPSoCs, one needs to decide which processors should participate in the compression and decompression activities at any given point during the course of execution. We propose both static and dynamic algorithms for this purpose. In the static scheme, the processors are divided into two groups: those performing compression/ decompression and those executing the application, and this grouping is maintained throughout the execution of the application. In the dynamic scheme, on the other hand, the execution starts with some grouping but this grouping can change during the course of execution, depending on the dynamic variations in the data access pattern. Our experimental results show that, in a single-core system, the proposed approach reduces maximum memory occupancy by 47.9% and average memory occupancy by 48.3% when averaged over all the benchmarks. Our results also indicate that, in an MPSoC, the average energy saving is 12.7% when all eight benchmarks are considered. While compressions and decompressions and related bookkeeping activities take extra cycles and memory space and consume additional energy, we found that the improvements they bring from the memory space, execution cycles, and energy perspectives are much higher than these overheads. © 2009 IEEE.