Browsing by Subject "Aromatic compounds"
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Item Open Access Bacteria encapsulated electrospun nanofibrous webs for remediation of methylene blue dye in water(Elsevier, 2017-04) Sarioglu O.F.; Keskin, N. O. S.; Celebioglu A.; Tekinay, T.; Uyar, TamerIn this study, preparation and application of novel biocomposite materials that were produced by encapsulation of bacterial cells within electrospun nanofibrous webs are described. A commercial strain of Pseudomonas aeruginosa which has methylene blue (MB) dye remediation capability was selected for encapsulation, and polyvinyl alcohol (PVA) and polyethylene oxide (PEO) were selected as the polymer matrices for the electrospinning of bacteria encapsulated nanofibrous webs. Encapsulation of bacterial cells was monitored by scanning electron microscopy (SEM) and fluorescence microscopy, and the viability of encapsulated bacteria was checked by live/dead staining and viable cell counting assay. Both bacteria/PVA and bacteria/PEO webs have shown a great potential for remediation of MB, yet bacteria/PEO web has shown higher removal performances than bacteria/PVA web, which was probably due to the differences in the initial viable bacterial cells for those two samples. The bacteria encapsulated electrospun nanofibrous webs were stored at 4 °C for three months and they were found as potentially storable for keeping encapsulated bacterial cells alive. Overall, the results suggest that electrospun nanofibrous webs are suitable platforms for preservation of living bacterial cells and they can be used directly as a starting inoculum for bioremediation of water systems.Item Open Access Cyclodextrin-functionalized mesostructured silica nanoparticles for removal of polycyclic aromatic hydrocarbons(Academic Press Inc., 2017) Topuz, F.; Uyar, T.Polycyclic aromatic hydrocarbons (PAHs) are the byproducts of the incomplete combustion of carbon-based fuels, and have high affinity towards DNA strands, ultimately exerting their carcinogenic effects. They are ubiquitous environmental contaminants, and can accumulate on tissues due to their lipophilic nature. In this article, we describe a novel concept for PAH removal from aqueous solutions using cyclodextrin-functionalized mesostructured silica nanoparticles (CDMSNs) and pristine mesostructured silica nanoparticles (MSNs). The adsorption applications of MSNs are greatly restricted due to the absence of surface functional groups on such particles. In this regard, cyclodextrins can serve as ideal functional molecules with their toroidal, cone-type structure, capable of inclusion-complex formation with many hydrophobic molecules, including genotoxic PAHs. The CDMSNs were synthesized by the surfactant-templated, NaOH-catalyzed condensation reactions of tetraethyl orthosilicate (TEOS) in the presence of two different types of cyclodextrin (i.e. hydroxypropyl-β-cyclodextrin (HP-β-CD) and native β-cyclodextrin (β-CD)). The physical incorporation of CD moieties was supported by XPS, FT-IR, NMR, TGA and solid-state 13C NMR. The CDMSNs were treated with aqueous solutions of five different PAHs (e.g. pyrene, anthracene, phenanthrene, fluorene and fluoranthene). The functionalization of MSNs with cyclodextrin moieties significantly boosted the sorption capacity (q) of the MSNs up to ∼2-fold, and the q ranged between 0.3 and 1.65 mg per gram CDMSNs, of which the performance was comparable to that of the activated carbon.Item Open Access DFT studies of CNT-functionalized uracil-acetate hybrids(Elsevier, 2015) Mirzaei, M.; Gulseren, O.Calculations based on density functional theory (DFT) have been performed to investigate the stabilities and properties of hybrid structures consisting of a molecular carbon nanotube (CNT) and uracil acetate (UA) counterparts. The investigated models have been relaxed to minimum energy structures and then various physical properties and nuclear magnetic resonance (NMR) properties have been evaluated. The results indicated the effects of functionalized CNT on the properties of hybrids through comparing the results of hybrids and individual structures. The oxygen atoms of uracil counterparts have been seen as the detection points of properties for the CNT-UA hybrids.Item Open Access Enhanced photocatalytic activity of homoassembled ZnO nanostructures on electrospun polymeric nanofibers: a combination of atomic layer deposition and hydrothermal growth(Elsevier, 2014) Kayaci, F.; Vempati S.; Ozgit Akgun, C.; Bıyıklı, Necmi; Uyar, TamerWe report on the synthesis and photocatalytic activity (PCA) of electrospun poly(acrylonitrile) (PAN) nanofibrous mat decorated with nanoneedles of zinc oxide (ZnO). Apart from a detailed morphological and structural characterization, the PCA has been carefully monitored and the results are discussed elaborately when juxtaposed with the photoluminescence. The present hierarchal homoassembled nanostructures are a combination of two types of ZnO with diverse optical qualities, i.e. (a) controlled deposition of ZnO coating on nanofibers with dominant oxygen vacancies and significant grain boundaries by atomic layer deposition (ALD), and (b) growth of single crystalline ZnO nanoneedles with high optical quality on the ALD seeds via hydrothermal process. The needle structure (~25. nm in diameter with an aspect ratio of ~24) also supports the vectorial transport of photo-charge carriers, which is crucial for high catalytic activity. Furthermore, it is shown that enhanced PCA is because of the catalytic activity at surface defects (on ALD seed), valence band, and conduction band (of ZnO nanoneedles). PCA and durability of the PAN/ZnO nanofibrous mat have also been tested with aqueous solution of methylene blue and the results showed almost no decay in the catalytic activity of this material when reused.Item Open Access Evaluation of fiber diameter and morphology differences for electrospun fibers on bacterial immobilization and bioremediation performance(Elsevier, 2017-05) Sarioglu O.F.; Celebioglu A.; Tekinay, T.; Uyar, TamerIn this report, morphology and fiber diameter differences of electrospun polysulfone (PSU) fibers on bacterial immobilization and bioremediation performance were evaluated. PSU fibers were produced with aligned or randomly oriented morphologies, and PSU fibers with thinner and thicker diameters were also produced. PSU fibers were utilized as carrier matrices for bacterial integration and the sample showing highest bacterial immobilization was tested for bioremediation of ammonium and methylene blue dye in water. It was found that randomly oriented and thinner PSU fibers are the optimal system for bacterial immobilization, hence bioremediation studies were performed with this sample. The results demonstrated that bacteria immobilized PSU fibers are promising candidates for simultaneous removal of ammonium and methylene blue dye, and they have a potential to be used in remediation of water systems.Item Open Access Genetically encoded conductive protein nanofibers secreted by engineered cells(Royal Society of Chemistry, 2017-06) Kalyoncu, E.; Ahan, R. E.; Olmez, T. T.; Safak Seker, U. O.Bacterial biofilms are promising tools for functional applications as bionanomaterials. They are synthesized by well-defined machinery, readily form fiber networks covering large areas, and can be engineered for different functionalities. In this work, bacterial biofilms have been engineered for use as conductive biopolymers to interface with electrodes and connect bacterial populations to electronic gadgets. Bacterial biofilms are designed with different conductive peptide motifs, as the aromatic amino acid content of fused peptide motifs has been suggested to contribute to electronic conductivity by influencing monomer stacking behavior. To select the best candidates for constructing conductive peptide motifs, conductivity properties of aromatic amino acids are measured using two different fiber scaffolds, an amyloid-like fiber (ALF) forming peptide, and the amyloidogenic R5T peptide of CsgA protein. Three repeats of aromatic amino acids are added to fiber-forming peptide sequences to produce delocalized π clouds similar to those observed in conductive polymers. Based on the measurements, tyrosine and tryptophan residues provide the highest conductivity. Therefore, the non-conductive E. coli biofilm is switched into a conductive form by genetically inserted conductive peptide motifs containing different combinations of tyrosine and tryptophan. Finally, synthetic biofilm biogenesis is achieved with conductive peptide motifs using controlled biofilm production. Conductive biofilms on living cells are formed for bioelectronics and biosensing applications.Item Open Access Multifunctional electrospun polymeric nanofibrous mats for catalytic reduction, photocatalysis and sensing(Royal Society of Chemistry, 2017) Arslan, O.; Uyar, TamerFabrication and decoration of flexible Nylon 6,6 polymeric nanofibrous mats for production of multifunctional electrospun material was accomplished via visible light-emitting surface-protected silicon quantum dots (Si QD), ZnO nanoparticles (ZnO NP) and Pd nanocubes (Pd NC). UV-range light was utilized for Si QD production and, after hydrolysis/condensation together with nucleation and growth reactions, amine-modified, fluorescent Si QD were obtained. Additionally, available molecular groups on the Si QD coated onto the polymeric nanofibrous mats provided further attachment of metal oxide and metal NP for various catalytic purposes. Analytical investigations showed that visible-light emission could be maintained on the Nylon 6,6 mats for trinitrotoluene (TNT) sensing. Also, due to consecutive NP decoration, multifunctional, polymeric, flexible nanofibrous mats were obtained. Experiments revealed that fabricated multifunctional mats could reduce molecules such as paranitrophenol effectively or decompose waste dyes such as methylene blue via photocatalytic experiments, and sense the pollutant TNT in aqueous solutions as an all-in-one concept.Item Open Access Multifunctional ZnO nanorod-reduced graphene oxide hybrids nanocomposites for effective water remediation: effective sunlight driven degradation of organic dyes and rapid heavy metal adsorption(Elsevier, 2017-10) Ranjith, K. S.; Manivel, P.; Rajendrakumar, R. T.; Uyar, TamerWe demonstrate the multi-functionality engineering on nanocomposite by combining one dimensional (1D) ZnO nanorod (NR) and two dimensional (2D) reduced graphene oxide (rGO) for efficient water remediation. Nano-engineered ZnO NR-rGO nanocomposites show efficient water remediation in terms of degradation of organic dyes and removal of heavy metal ions. Herein, we report on the fabrication of ZnO NR-rGO nanocomposite via a facile template-free hydrothermal route with an aim to improve the visible photocatalytic efficiency of the ZnO NR based nanocomposites. The structural and morphological features reveal that the rGO sheets are attached on the ZnO NRs and form a hybrid composite assembly. The surface enabled ZnO NR-rGO nanocomposites were used to degrade organic dye molecules (methylene blue (MB), methyl orange (MO) and rhodamine B (RhB)) under visible irradiation and adsorb Cu (II) and Co (II) ions from water through an adsorption process. The nanocomposite containing 7.5 wt% rGO and ZnO NRs shows a 4-fold enhancement in the visible photocatalytic activity and effective removal of Cu (II) and Co (II) ions from aqueous solution respectively. The photocatalytic performance is discussed in detail with respect to interaction between ZnO NRs and rGO sheets, light-harvesting properties of the nanocomposites. The effective experimental adsorption data also fit very well with the pseudo-second-order model which reveals the surface adsorption of metal ions. The results provide insight into a new method utilize for both visible photo degradation and adsorption for the removal of various wastewater pollutants. Construction of hybrid form of nanostructures delivers the effective catalytic properties with tunable functionalities for the water remediation.Item Open Access Nanograined surface shell wall controlled ZnO–ZnS core–shell nanofibers and their shell wall thickness dependent visible photocatalytic properties(Royal Society of Chemistry, 2017) Ranjith, K. S.; Senthamizhan A.; Balusamy, B.; Uyar, TamerThe core-shell form of ZnO-ZnS based heterostructural nanofibers (NF) has received increased attention for use as a photocatalyst owing to its potential for outstanding performance under visible irradiation. One viable strategy to realize the efficient separation of photoinduced charge carriers in order to improve catalytic efficiency is to design core-shell nanostructures. But the shell wall thickness plays a vital role in effective carrier separation and lowering the recombination rate. A one dimensional (1D) form of shell wall controlled ZnO-ZnS core-shell nanofibers has been successfully prepared via electrospinning followed by a sulfidation process. The ZnS shell wall thickness can be adjusted from 5 to 50 nm with a variation in the sulfidation reaction time between 30 min and 540 min. The results indicate that the surfaces of the ZnO nanofibers were converted to a ZnS shell layer via the sulfidation process, inducing visible absorption behavior. Photoluminescence (PL) spectral analysis indicated that the introduction of a ZnS shell layer improved electron and hole separation efficiency. A strong correlation between effective charge separation and the shell wall thickness aids the catalytic behavior of the nanofiber network and improves its visible responsive nature. The comparative degradation efficiency toward methylene blue (MB) has been studied and the results showed that the ZnO-ZnS nanofibers with a shell wall thickness of ∼20 nm have 9 times higher efficiency than pristine ZnO nanofibers, which was attributed to effective charge separation and the visible response of the heterostructural nanofibers. In addition, they have been shown to have a strong effect on the degradation of Rhodamine B (Rh B) and 4-nitrophenol (4-NP), with promising reusable catalytic efficiency. The shell layer upgraded the nanofiber by acting as a protective layer, thus avoiding the photo-corrosion of ZnO during the catalytic process. A credible mechanism for the charge transfer process and a mechanism for photocatalysis supported by trapping experiments in the ZnO-ZnS heterostructural system for the degradation of an aqueous solution of MB are also explicated. Trapping experiments indicate that h+ and OH are the main active species in the ZnO-ZnS heterostructural catalyst, which do not effectively contribute in a bare ZnO catalytic system. Our work also highlights the stability and recyclability of the core-shell nanostructure photocatalyst and supports its potential for environmental applications. We thus anticipate that our results show broad potential in the photocatalysis domain for the design of a visible light functional and reusable core-shell nanostructured photocatalyst.Item Open Access Poly-cyclodextrin cryogels with aligned porous structure for removal of polycyclic aromatic hydrocarbons (PAHs) from water(Elsevier, 2017-08) Topuz, F.; Uyar, TamerCyclodextrins (CDs) are sugar-based cyclic oligosaccharides, which form inclusion complexes with small guest molecules through their hydrophobic cavity. Here we successfully synthesized highly porous poly-cyclodextrin (poly-CD) cryogels, which were produced under cryogenic conditions by the cross-linking of amine-functional CDs with PEG-based diepoxide cross-linker. The poly-CD cryogels showed aligned porous network structures owing to the directional freezing of the matrix, of which the pore size and architecture exposed variations depending on the composition of the reactants. The cryogels were employed for the removal of genotoxic polycyclic aromatic hydrocarbons (PAHs) from aqueous solutions. They reached PAH sorption capacities as high as 1.25 mg PAH per gram cryogel. This high sorption performance is due to interactions between PAHs and the complete swollen network, and thus, is not restricted by interfacial adsorption. Given that the hydrophilic nature of the components, the sorption performance could only be attributed to the inclusion complex formation of CDs with PAH molecules. The poly-CD cryogels could be recycled with an exposure to ethanol and reused without any significant loss in the sorption capacity of PAHs.Item Open Access Systematic hydrolysis of PIM-1 and electrospinning of hydrolyzed PIM-1 ultrafine fibers for an efficient removal of dye from water(Elsevier, 2017-12) Satilmis, B.; Budd, P. M.; Uyar, TamerIn this study, the Polymer of Intrinsic Microporosity (PIM-1) was systematically hydrolyzed in the presence of sodium hydroxide by varying the concentration of base, washing procedure and the time of the reaction. The chemical structure analyses confirmed that PIM-1 could be hydrolyzed by 65% up to 99% conversion depending on the synthesis procedure. The hydrolyzed PIM-1 samples have shown improved solubility which facilitates the fabrication of hydrolyzed PIM-1 ultrafine fibers by electrospinning technique. Extensive optimization studies were performed for the electrospinning of uniform and bead-free fibers from hydrolyzed PIM-1 with different degree of hydrolysis (65%, 86%, 94% and 99%). The electrospun hydrolysed PIM-1 fibrous samples have average fiber diameters (AFD) ranging from 0.58 ± 0.15 μm to 1.21 ± 0.15 μm, depending on the polymer concentration and applied electrospinning parameters. After electrospinning, self-standing hydrolyzed PIM-1 fibrous membranes were obtained which is useful as a filtering material for the adsorption of organic dyes from wastewater. Here, the capability of hydrolyzed PIM-1 electrospun fibrous membranes for the removal of dyes from aqueous solutions was investigated by using a batch adsorption process. The maximum adsorption capacity of fully hydrolyzed PIM-1 fibers was found 157 ± 16 mg g− 1 for Methylene Blue and 4 mg g− 1 for Congo red when the adsorption was conducted by 20 mg L− 1 dye solution without using any dilution. Moreover, maximum dye adsorption was also studied by using concentrated Methylene Blue solutions showing up to 272 mg g− 1 adsorption maximum. In addition, the self-standing fibrous hydrolyzed PIM-1 membrane was employed to separate Methylene Blue from an aqueous system by filtration without the necessity of additional driving force. The results indicate that hydrolyzed PIM-1 electrospun nanofibrous membranes can be a promising filtering material for wastewater treatmentItem Open Access Ultrahigh green and red optical gain cross sections from solutions of colloidal quantum well heterostructures(American Chemical Society, 2021-03-11) Delikanli, Savaş; Erdem, Onur; Işık, Furkan; Dehghanpour Baruj, Hamed; Shabani, Farzan; Yağcı, Hüseyin Bilge; Durmuşoğlu, E. G.; Demir, Hilmi VolkanWe demonstrate amplified spontaneous emission (ASE) in solution with ultralow thresholds of 30 μJ/cm2 in red and of 44 μJ/cm2 in green from engineered colloidal quantum well (CQW) heterostructures. For this purpose, CdSe/CdS core/crown CQWs, designed to hit the green region, and CdSe/CdS@CdxZn1–xS core/crown@gradient-alloyed shell CQWs, further tuned to reach the red region by shell alloying, were employed to achieve high-performance ASE in the visible range. The net modal gain of these CQWs reaches 530 cm–1 for the green and 201 cm–1 for the red, 2–3 orders of magnitude larger than those of colloidal quantum dots (QDs) in solution. To explain the root cause for ultrahigh gain coefficient in solution, we show for the first time that the gain cross sections of these CQWs is ≥3.3 × 10–14 cm2 in the green and ≥1.3 × 10–14 cm2 in the red, which are two orders of magnitude larger compared to those of CQDs.Item Open Access ZnO nanostructures on electrospun nanofibers by atomic layer deposition/hydrothermal growth and their photocatalytic activity(Materials Research Society, 2014) Kayaci, Fatma; Vempati, Sesha; Ozgit-Akgun, Cagla; Biyikli, Necmi; Uyar, TamerA hierarchy of nanostructured-ZnO was fabricated on the electrospun nanofibers by atomic layer deposition (ALD) and hydrothermal growth, subsequently. Firstly, we produced poly(acrylonitrile) (PAN) nanofibers via electrospinning, then ALD process provided a highly uniform and conformai coating of polycrystalline ZnO with a precise control on the thickness (50 nm). In the last step, this ZnO coating depicting dominant oxygen vacancies and significant grain boundaries was used as a seed on which single crystalline ZnO nanoneedles (average diameter and length of ∼25 nm and ∼600 nm, respectively) with high optical quality were hydrothermally grown. The detailed morphological and structural studies were performed on the resulting nanofibers, and the photocatalytic activity (PCA) was tested with reference to the degradation of methylene blue. The results of PCA were discussed in conjunction with photoluminescence response. The nanoneedle structures supported the vectorial transport of photo-charge carriers, which is crucial for high catalytic activity. The enhanced PCA, structural stability and reusability of the PAN/ZnO nanoneedles indicated that this hierarchical structure is a potential candidate for waste water treatment.