Browsing by Author "Kurc, T."
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Item Open Access Adaptive decomposition and remapping algorithms for object-space-parallel direct volume rendering of unstructured grids(Academic Press, 2007-01) Aykanat, Cevdet; Cambazoglu, B. B.; Findik, F.; Kurc, T.Object space (OS) parallelization of an efficient direct volume rendering algorithm for unstructured grids on distributed-memory architectures is investigated. The adaptive OS decomposition problem is modeled as a graph partitioning (GP) problem using an efficient and highly accurate estimation scheme for view-dependent node and edge weighting. In the proposed model, minimizing the cutsize corresponds to minimizing the parallelization overhead due to the data communication and redundant computation/storage while maintaining the GP balance constraint corresponds to maintaining the computational load balance in parallel rendering. A GP-based, view-independent cell clustering scheme is introduced to induce more tractable view-dependent computational graphs for successive visualizations. As another contribution, a graph-theoretical remapping model is proposed as a solution to the general remapping problem and is used in minimization of the cell-data migration overhead. The remapping tool RM-MeTiS is developed by modifying the GP tool MeTiS and is used in partitioning the remapping graphs. Experiments are conducted using benchmark datasets on a 28-node PC cluster to evaluate the performance of the proposed models. © 2006 Elsevier Inc. All rights reserved.Item Open Access Malignant-lesion segmentation using 4D co-occurrence texture analysis applied to dynamic contrast-enhanced magnetic resonance breast image data(2007) Woods, B.J.; Clymer, B.D.; Kurc, T.; Heverhagen J.T.; Stevens, R.; Orsdemir, A.; Bulan O.; Knopp, M.V.Purpose: To investigate the use of four-dimensional (4D) co-occurrence-based texture analysis to distinguish between nonmalignant and malignant tissues in dynamic contrast-enhanced (DCE) MR images. Materials and Methods: 4D texture analysis was performedon DCE-MRI data sets of breast lesions. A model-free neural network-based classification system assigned each voxel a "nonmalignant" or "malignant" label based on the textural features. The classification results were compared via receiver operating characteristic (ROC) curve analysis with the manual lesion segmentation produced by two radiologists (observers 1 and 2). Results: The mean sensitivity and specificity of the classifier agreed with the mean observer 2 performance when compared with segmentations by observer 1 for a 95% confidence interval, using a two-sided t-test with α = 0.05. The results show that an area under the ROC curve (Az) of 0.99948, 0.99867, and 0.99957 can be achieved by comparing the classifier vs. observer 1, classifier vs. union of both observers, and classifier vs. intersection of both observers, respectively. Conclusion: This study shows that a neural network classifier based on 4D texture analysis inputs can achieve a performance comparable to that achieved by human observers, and that further research in this area is warranted. © 2007 Wiley-Liss, Inc.