Browsing by Author "Ekiz, O. O."

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Open Access
Counting molecules with a mobile phone camera using plasmonic enhancement
(American Chemical Society, 2014) Ayas S.; Cupallari, A.; Ekiz, O. O.; Kaya, Y.; Dana, A.
Plasmonic field enhancement enables the acquisition of Raman spectra at a single molecule level. Here we investigate the detection of surface enhanced Raman signal using the unmodified image sensor of a smart phone, integrated onto a confocal Raman system. The sensitivity of a contemporary smart phone camera is compared to a photomultiplier and a cooled charge-coupled device. The camera displays a remarkably high sensitivity, enabling the observation of the weak unenhanced Raman scattering signal from a silicon surface, as well as from liquids, such as ethanol. Using high performance wide area plasmonic substrates that enhance the Raman signal 106 to 107 times, blink events typically associated with single molecule motion, are observed on the smart phone camera. Raman spectra can also be collected on the smart phone by converting the camera into a low resolution spectrometer with the inclusion of a collimator and a dispersive optical element in front of the camera. In this way, spectral content of the blink events can be observed on the plasmonic substrate, in real time, at 30 frames per second. (Figure Presented) © 2013 American Chemical Society.
Open Access
Grating coupler integrated photodiodes for plasmon resonance based sensing
(Royal Society of Chemistry, 2011) Turker, B.; Guner, H.; Ayas S.; Ekiz, O. O.; Acar, H.; Güler, Mustafa O.; Dâna, A.
In this work, we demonstrate an integrated sensor combining a grating-coupled plasmon resonance surface with a planar photodiode. Plasmon enhanced transmission is employed as a sensitive refractive index (RI) sensing mechanism. Enhanced transmission of light is monitored via the integrated photodiode by tuning the angle of incidence of a collimated beam near the sharp plasmon resonance condition. Slight changes of the effective refractive index (RI) shift the resonance angle, resulting in a change in the photocurrent. Owing to the planar sensing mechanism, the design permits a high areal density of sensing spots. In the design, absence of holes that facilitate resonant transmission of light, allows an easy-to-implement fabrication procedure and relative insensitivity to fabrication errors. Theoretical and experimental results agree well. An equivalent long-term RI noise of 6.3 × 10 -6 is obtained by using an 8 mW He-Ne laser, compared to a shot-noise limited theoretical sensitivity of 5.61 × 10-9. The device features full benefits of grating-coupled plasmon resonance, such as enhancement of sensitivity for non-zero azimuthal angle of incidence. Further sensitivity enhancement using balanced detection and optimal plasmon coupling conditions are discussed. © 2011 The Royal Society of Chemistry.
Open Access
Portable microfluidic integrated plasmonic platform for pathogen detection
(Nature Publishing Group, 2015) Tokel, O.; Yildiz, U. H.; Inci, F.; Durmus, N. G.; Ekiz, O. O.; Turker, B.; Cetin, C.; Rao, S.; Sridhar, K.; Natarajan, N.; Shafiee, H.; Dana, A.; Demirci, U.
Timely detection of infectious agents is critical in early diagnosis and treatment of infectious diseases. Conventional pathogen detection methods, such as enzyme linked immunosorbent assay (ELISA), culturing or polymerase chain reaction (PCR) require long assay times, and complex and expensive instruments, which are not adaptable to point-of-care (POC) needs at resource-constrained as well as primary care settings. Therefore, there is an unmet need to develop simple, rapid, and accurate methods for detection of pathogens at the POC. Here, we present a portable, multiplex, inexpensive microfluidic-integrated surface plasmon resonance (SPR) platform that detects and quantifies bacteria, i.e., Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus) rapidly. The platform presented reliable capture and detection of E. coli at concentrations ranging from ∼105 to 3.2 × 107 CFUs/mL in phosphate buffered saline (PBS) and peritoneal dialysis (PD) fluid. The multiplexing and specificity capability of the platform was also tested with S. aureus samples. The presented platform technology could potentially be applicable to capture and detect other pathogens at the POC and primary care settings. © 2015, Nature Publishing Group. All rights reserved.
Open Access
Raman enhancement on a broadband meta-surface
(American Chemical Society, 2012-07-30) Ayas S.; Güner, H.; Türker, B.; Ekiz, O. O.; Dirisaglik, F.; Okyay, Ali Kemal; Dâna, A.
Plasmonic metamaterials allow confinement of light to deep subwavelength dimensions, while allowing for the tailoring of dispersion and electromagnetic mode density to enhance specific photonic properties. Optical resonances of plasmonic molecules have been extensively investigated; however, benefits of strong coupling of dimers have been overlooked. Here, we construct a plasmonic meta-surface through coupling of diatomic plasmonic molecules which contain a heavy and light meta-atom. Presence and coupling of two distinct types of localized modes in the plasmonic molecule allow formation and engineering of a rich band structure in a seemingly simple and common geometry, resulting in a broadband and quasi-omni-directional meta-surface. Surface-enhanced Raman scattering benefits from the simultaneous presence of plasmonic resonances at the excitation and scattering frequencies, and by proper design of the band structure to satisfy this condition, highly repeatable and spatially uniform Raman enhancement is demonstrated. On the basis of calculations of the field enhancement distribution within a unit cell, spatial uniformity of the enhancement at the nanoscale is discussed. Raman scattering constitutes an example of nonlinear optical processes, where the wavelength conversion during scattering may be viewed as a photonic transition between the bands of the meta-material.
Open Access
Reversible electrical reduction and oxidation of graphene oxide
(American Chemical Society, 2011) Ekiz, O. O.; Ürel, M.; Güner, H.; Mizrak, A. K.; Dâna, A.
We demonstrate that graphene oxide can be reversibly reduced and oxidized using electrical stimulus. Controlled reduction and oxidation in two-terminal devices containing multilayer graphene oxide films are shown to result in switching between partially reduced graphene oxide and graphene, a process which modifies the electronic and optical properties. High-resolution tunneling current and electrostatic force imaging reveal that graphene oxide islands are formed on multilayer graphene, turning graphene into a self-assembled heterostructure random nanomesh. Charge storage and resistive switching behavior is observed in two-terminal devices made of multilayer graphene oxide films, correlated with electrochromic effects. Tip-induced reduction and oxidation are also demonstrated. Results are discussed in terms of thermodynamics of oxidation and reduction reactions. © 2011 American Chemical Society.
Open Access
Towards unimolecular luminescent solar concentrators: bodipy-based dendritic energy-transfer cascade with panchromatic absorption and monochromatized emission
(2011) Bozdemir, O. A.; Erbas-Cakmak, S.; Ekiz, O. O.; Dana, A.; Akkaya, E. U.
A polymer-embedded dendritic, bodipy-based panchromatic absorber with a built-in energy gradient concentrates incident solar radiation at a terminal chromophore, resulting in a monochromatized emission directed to the sides of the polymer waveguide (see picture). This particular design minimizes self-absorption losses from the peripheral antenna units with an impressive S factor of 10 000.