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      Microarray data analysis and pathway activity inference in PATIKA

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      Author(s)
      Babur, Özgün
      Demir, Emek
      Ayaz, Aslı
      Doğrusöz, Uğur
      Sakarya, Onur
      Date
      2004
      Source Title
      Proceedings 12th ISMB / 3rd ECCB 2004
      Publisher
      ISCB Org
      Language
      English
      Type
      Presentation
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      Abstract
      Pathway activity inference attempts to infer differential activity of cellular networks, given a qualitative state - transition model of the network and an expression profile of RNA molecules. We present an efficient algorithm for this problem, implemented as part of microarray data analysis component of PATIKA, a pathway analysis tool.
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      http://hdl.handle.net/11693/53615
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      • Bilkent Center for Bioinformatics (BCBI) 19
      • Department of Computer Engineering 1510
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