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dc.contributor.authorIersel, Martijn P. vanen_US
dc.contributor.authorVilléger, A. C.en_US
dc.contributor.authorCzauderna, T.en_US
dc.contributor.authorBoyd, S. E.en_US
dc.contributor.authorBergmann, F. T.en_US
dc.contributor.authorLuna, A.en_US
dc.contributor.authorDemir, E.en_US
dc.contributor.authorSorokin, A.en_US
dc.contributor.authorDogrusoz, U.en_US
dc.contributor.authorMatsuoka, Y.en_US
dc.contributor.authorFunahashi, A.en_US
dc.contributor.authorAladjem, M. I.en_US
dc.contributor.authorMi, H.en_US
dc.contributor.authorMoodie, S. L.en_US
dc.contributor.authorKitano, H.en_US
dc.contributor.authorLe novère, N.en_US
dc.contributor.authorSchreiber, F.en_US
dc.date.accessioned2016-02-08T09:45:33Z
dc.date.available2016-02-08T09:45:33Z
dc.date.issued2012en_US
dc.identifier.issn1367-4803
dc.identifier.urihttp://hdl.handle.net/11693/21386
dc.description.abstractMotivation: LibSBGN is a software library for reading, writing and manipulating Systems Biology Graphical Notation (SBGN) maps stored using the recently developed SBGN-ML file format. The library (available in C++ and Java) makes it easy for developers to add SBGN support to their tools, whereas the file format facilitates the exchange of maps between compatible software applications. The library also supports validation of maps, which simplifies the task of ensuring compliance with the detailed SBGN specifications. With this effort we hope to increase the adoption of SBGN in bioinformatics tools, ultimately enabling more researchers to visualize biological knowledge in a precise and unambiguous manner. © The Author(s) 2012. Published by Oxford University Press.en_US
dc.language.isoEnglishen_US
dc.source.titleBioinformaticsen_US
dc.relation.isversionofhttp://dx.doi.org/10.1093/bioinformatics/bts270en_US
dc.subjectBiologyen_US
dc.subjectComputer languageen_US
dc.subjectComputer programen_US
dc.subjectMethodologyen_US
dc.subjectSystems biologyen_US
dc.subjectComputational biologyen_US
dc.subjectProgramming languagesen_US
dc.subjectSoftwareen_US
dc.titleSoftware support for SBGN maps: SBGN-ML and LibSBGNen_US
dc.typeArticleen_US
dc.departmentDepartment of Computer Engineering
dc.citation.spage2016en_US
dc.citation.epage2021en_US
dc.citation.volumeNumber28en_US
dc.citation.issueNumber15en_US
dc.identifier.doi10.1093/bioinformatics/bts270en_US
dc.publisherOxford University Pressen_US


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