Browsing by Author "Demirci, S."
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Item Open Access Cyclodextrin-grafted electrospun cellulose acetate nanofibers via "Click" reaction for removal of phenanthrene(Elsevier, 2014-06-30) Çelebioğlu, A.; Demirci, S.; Uyar, T.Beta-cyclodextrin (p-CD) functionalized cellulose acetate (CA) nanofibers have been successfully prepared by combining electrospinning and "click" reaction. Initially, p-CD and electrospun CA nanofibers were modified so as to be azide-p-CD and propargyl-terminated CA nanofibers, respectively. Then, "click" reaction was performed between modified CD molecules and CA nanofibers to obtain permanent grafting of CDs onto nanofibers surface. It was observed from the SEM image that, while CA nanofibers have smooth surface, there were some irregularities and roughness at nanofibers morphology after the modification. Yet, the fibrous structure was still protected. ATR-FTIR and XPS revealed that, CD molecules were successfully grafted onto surface of CA nanofibers. The adsorption capacity of p-CD-functionalized CA (CA-CD) nanofibers was also determined by removing phenanthrene (polycyclic aromatic hydrocarbons, PAH) from its aqueous solution. Our results indicate that CA-CD nanofibers have potential to be used as molecular filters for the purpose of water purification and waste water treatment by integrating the high surface area of nanofibers with inclusion complexation property of CD molecules.Item Open Access Functional carbon and silicon monolayers in biphenylene network(American Chemical Society, 2022-06-28) Gorkan, T.; Çallıoǧlu, Şafak; Demirci, S.; Aktürk, E.; Ciraci, S.We investigated the effects of vacancy, void, substitutional impurity, isolated adsorption of selected adatoms, and their patterned coverage on the physical and chemical properties of metallic carbon and silicon monolayers in a biphenylene network. These monolayers can acquire diverse electronic and magnetic properties to become more functional depending on the repeating symmetry, size of the point defects, and on the type of adsorbed adatoms. While a carbon monovacancy attains a local magnetic moment, its void can display closed edge states with interesting physical effects. Adsorbed light-transition or rare-earth metal atoms attribute magnetism to these monolayers. The opening of a gap in the metallic density of states, which depends on the pattern and density of adsorbed hydrogen, oxygen, and carbon adatoms, can be used as the band gap engineering of these two-dimensional materials. The energy barriers against the passage of oxygen atoms through the centers of hexagon and octagon rings are investigated, and the coating of the active surfaces with carbon monolayers is exploited as a means of protection against oxidation. We showed that the repulsive forces exerting even at distant separations between two parallel, hydrogenated carbon monolayers in a biphenylene network can lead to the superlow friction features in their sliding motion. All these results obtained from the calculations using the density functional theory herald critical applications.Item Open Access Hydrogenated carbon monolayer in biphenylene network offers a potential paradigm for nanoelectronic devices(American Chemical Society, 2022-09-15) Demirci, S.; Gorkan, T.; Çallıoǧlu, Şafak; Özçelik, V. O.; Barth, J.; Aktürk, E.; Çıracı, SalimA metallic carbon monolayer in the biphenylene network (specified as C ohs) becomes an insulator upon hydrogenation (specified as CH ohs). Patterned dehydrogenation of this CH ohs can offer a variety of intriguing functionalities. Composite structures constituted by alternating stripes of C and CH ohs with different repeat periodicity and chirality display topological properties and can form heterostructures with a tunable band-lineup or Schottky barrier height. Alternating arrangements of these stripes of finite size enable one to also construct double barrier resonant tunneling structures and 2D, lateral nanocapacitors with high gravimetric capacitance for an efficient energy storage device. By controlled removal of H atom from a specific site or dehydrogenation of an extended zone, one can achieve antidoping or construct 0D quantum structures like antidots, antirings/loops, and supercrystals, the energy level spacing of which can be controlled with their geometry and size for optoelectronic applications. Conversely, all these device functions can be acquired also by controlled hydrogenation of a bare C ohs monolayer. Since all these processes are applied to a monolayer, the commensurability of electronically different materials is assured. These features pertain not only to CH ohs but also to fully hydrogenated Si ohs.Item Open Access Magnetization of silicene via coverage with gadolinium: effects of thickness, symmetry, strain, and coverage(American Physical Society, 2021-12-14) Demirci, S.; Gorkan, T.; Çallioğlu, Şafak; Yüksel, Y.; Akıncı, Ü.; Aktürk, E.; Çıracı, SalimWhen covered by gadolinium (Gd) atoms, silicene, a freestanding monolayer of Si atoms in a honeycomb network, remains stable above the room temperature and becomes a two-dimensional (2D) ferromagnetic semiconductor, despite the antiferromagnetic ground state of three-dimensional bulk GdSi2 crystal. In thin GdSi2 multilayers, even if magnetic moments are ordered parallel in the same Gd atomic planes, they are antiparallel between nearest Gd planes; hence they exhibit a ferrimagnetic behavior. In contrast, a freestanding Gd2Si2 monolayer constructed by covering silicene from both sides by Gd atoms is a stable antiferromagnetic metal due to the mirror symmetry. While multilayers covered by Gd from both sides having an odd number of Gd planes have a ferrimagneticlike ground state, even-numbered ones have antiferromagnetic ground state, but none of them is ferromagnetic. Silicon atoms intervening between Gd planes are responsible for these intriguing magnetic orders conforming with the recent experiments performed on Si(111) surface. Additionally, the magnetic states of these 2D gadolinium disilicide monolayers can be monitored by applied tensile strain and by the coverage/decoration of Gd. These predictions obtained by using first-principles, spin-polarized, density functional theory calculations combined with Monte Carlo simulations herald that C, B, Si, Ge, Sn, and their compounds functionalized by rare-earth atoms can lead to novel nanostructures in 2D spintronics.Item Open Access Modification of electronic structure, magnetic structure, and topological phase of bismuthene by point defects(American Physical Society, 2017) Kadioglu, Y.; Kilic, S. B.; Demirci, S.; Aktürk, O. Ü.; Aktürk, E.; Çıracı, SalimThis paper reveals how the electronic structure, magnetic structure, and topological phase of two-dimensional (2D), single-layer structures of bismuth are modified by point defects. We first showed that a free-standing, single-layer, hexagonal structure of bismuth, named h-bismuthene, exhibits nontrivial band topology. We then investigated interactions between single foreign adatoms and bismuthene structures, which comprise stability, bonding, electronic structure, and magnetic structures. Localized states in diverse locations of the band gap and resonant states in band continua of bismuthene are induced upon the adsorption of different adatoms, which modify electronic and magnetic properties. Specific adatoms result in reconstruction around the adsorption site. Single vacancies and divacancies can form readily in bismuthene structures and remain stable at high temperatures. Through rebondings, Stone-Whales-type defects are constructed by divacancies, which transform into a large hole at high temperature. Like adsorbed adatoms, vacancies induce also localized gap states, which can be eliminated through rebondings in divacancies. We also showed that not only the optical and magnetic properties, but also the topological features of pristine h-bismuthene can be modified by point defects. The modification of the topological features depends on the energies of localized states and also on the strength of coupling between point defects. © 2017 American Physical Society.Item Open Access pH-responsive nanofibers with controlled drug release properties(Royal Society of Chemistry, 2014-12-02) Demirci, S.; Celebioglu A.; Aytac, Z.; Uyar, TamerSmart polymers and nanofibers are potentially intriguing materials for controlled release of bioactive agents. This work describes a new class of pH responsive nanofibers for drug delivery systems with controlled release properties. Initially, poly(4-vinylbenzoic acid-co-(ar-vinylbenzyl) trimethylammonium chloride) [poly(VBA-co-VBTAC)] was synthesized via reversible addition-fragmentation chain transfer (RAFT) polymerization. Then, ciprofloxacin was chosen as the model drug for the release study and encapsulated into pH-responsive polymeric carriers of poly(VBA-co-VBTAC) nanofibers via electrospinning. The morphology of the electrospun nanofibers was examined by scanning electron microscopy (SEM). The structural characteristics of the pH responsive nanofibers were investigated by Fourier transform infrared spectroscopy (FTIR) and X-ray diffraction (XRD). The release measurements of ciprofloxacin from pH responsive nanofibers were also performed by high-performance liquid chromatography (HPLC) analysis. To show the pH sensitivity of these nanofibers, the release profile of ciprofloxacin was examined under acidic, neutral and basic conditions. The results indicate that pH responsive nanofibers can serve as effective drug carriers since the release of ciprofloxacin could be controlled by changing the pH of the environment, and therefore these drug loaded pH-responsive nanofibers might have potential applications in the biomedical field. This journal is © The Royal Society of Chemistry.Item Open Access Poly(vinyl amine) microparticles derived from N-Vinylformamide and their versatile use(Springer, 2021-09-03) Demirci, S.; Sütekin, S.Duygu; Kurt, S.B.; Güven, O.; Sahiner, N.Cationic polymers with primary amine groups that can easily be functionalized or coupled with substrates by complexation or hydrogen bonding are especially advantageous in preparing particles for biomedical applications. Poly(vinyl amine) (PVAm) is a cationic polyelectrolyte containing the highest number of primary amine groups among any other polymers. Here, we introduce a general method in synthesizing PVAm microparticles via a surfactant-free water-in-oil emulsion technique using cyclohexane as the oil phase and aqueous PVAm solution as the dispersed phase. PVAm particles were prepared to employ two different bifunctional chemical crosslinkers, divinyl sulfone (DVS) and poly(ethylene glycol) diglycidyl ether (PEGGE). The prepared particles were further treated with HCl to protonate the amine groups of PVAm within particles. The effect of crosslinker types and pH on the hydrolytic degradation of PVAm particles were also investigated at three different solution pHs, 5.4, 7.4, and 9, to simulate the skin, blood, and intestinal pH environments, respectively. The blood compatibility of the PVAm particles was evaluated by in vitro hemolysis and blood clotting assays. Furthermore, antifungal and antibacterial efficacy of PVAm-based particles and their protonated forms were tested against C. albicans yeast and E. coli, S. aureus, B. subtilis, and P. aeruginosa bacterial strains. © 2021, The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.Item Open Access Stability and electronic properties of monolayer and multilayer structures of group-IV elements and compounds of complementary groups in biphenylene network(American Physical Society, 2022-01-07) Demirci, S.; Çallıoğlu, Şafak; Görkan, T.; Aktürk, E.; Çıracı, SalimWe predict that specific group-IV elements and IV-IV, III-V, and II-VI compounds can form stable, freestanding two-dimensional (2D) monolayers consisting of octagon, hexagon, and square rings (ohs), in which the threefold coordination of atoms is preserved to allow sp2-type hybridization. These monolayers can also construct bilayers, multilayers, three-dimensional (3D) layered van der Waals solids, and 3D crystals with strong vertical bonds between layers as well as quasi-one-dimensional nanotubes and nanoribbons with diverse edge geometries. All these ohs structures can constitute a large class of 2D materials ranging from good metals to wide bandgap semiconductors and display physical and chemical properties rather different from those of their counterparts in the hexagonal (honeycomb) network. The metallic state of freestanding 2D C, Si, and Ge ohs monolayers and 3D C ohs bulk contrast, respectively, with graphene, silicene, germanene, and graphite.Item Open Access Structural and electronic properties of monolayer group III monochalcogenides(American Physical Society, 2017-03) Demirci, S.; Avazll, N.; Durgun, Engin; Cahangirov, S.We investigate the structural, mechanical, and electronic properties of the two-dimensional hexagonal structure of group III-VI binary monolayers, MX (M=B, Al, Ga, In and X=O, S, Se, Te) using first-principles calculations based on the density functional theory. The structural optimization calculations and phonon spectrum analysis indicate that all of the 16 possible binary compounds are thermally stable. In-plane stiffness values cover a range depending on the element types and can be as high as that of graphene, while the calculated bending rigidity is found to be an order of magnitude higher than that of graphene. The obtained electronic band structures show that MX monolayers are indirect band-gap semiconductors. The calculated band gaps span a wide optical spectrum from deep ultraviolet to near infrared. The electronic structure of oxides (MO) is different from the rest because of the high electronegativity of oxygen atoms. The dispersions of the electronic band edges and the nature of bonding between atoms can also be correlated with electronegativities of constituent elements. The unique characteristics of group III-VI binary monolayers can be suitable for high-performance device applications in nanoelectronics and optics.Item Open Access Surface modification of electrospun cellulose acetate nanofibers via RAFT polymerization(2012) Demirci, S.; Çelebioğlu, A.; Uyar, T.Item Open Access Surface modification of electrospun cellulose acetate nanofibers via RAFT polymerization for DNA adsorption(Elsevier, 2014-11-26) Demirci, S.; Celebioglu A.; Uyar, TamerWe report on a facile and robust method by which surface of electrospun cellulose acetate (CA) nanofibers can be chemically modied with cationic polymer brushes for DNA adsorption. The surface of CA nanofibers was functionalized by growing poly[(ar-vinylbenzyl)trimethylammonium chloride)] [poly(VBTAC)] brushes through a multi-step chemical sequence that ensures retention of mechanically robust nanofibers. Initially, the surface of the CA nanofibers was modified with RAFT chain transfer agent. Poly(VBTAC) brushes were then prepared via RAFT-mediated polymerization from the nanofiber surface. DNA adsorption capacity of CA nanofibrous web surface functionalized with cationic poly(VBTAC) brushes was demonstrated. The reusability of these webs was investigated by measuring the adsorption capacity for target DNA in a cyclic manner. In brief, CA nanofibers surface-modified with cationic polymer brushes can be suitable as membrane materials for filtration, purification, and/or separation processes for DNA.