Now showing items 1-5 of 5

    • Efficient querying of SBGN maps stored in a graph database 

      Karaca, Mustafa Enes (Bilkent University, 2019-02)
      Graph visualization is an important research area that endeavors to make graphs more understandable and easier to analyze. In various domains, graph visualization techniques and standards are developed to effectively ...
    • Libraries and tools for viewing and editing biological maps in SBGN 

      Siper, Metin Can (Bilkent University, 2017-08)
      Information about cellular processes and pathways is becoming increasingly available in detailed, computable standard formats including Systems Biology Graphical Notation (SBGN). E ective visualization of this information ...
    • Methods and tools for visualization and management of SBGN process description maps 

      Sarı, Mecit (Bilkent University, 2014)
      Graphs are commonly used to model relational information in many areas such as relational databases, software engineering, biological and social networks. In visualization of graphs, automatic layout, interactive editing ...
    • Semantic validation of biological maps in SBGN 

      Çalış, Umut Utku (Bilkent University, 2019-09)
      Graph visualization is a research field where relational information is graphically represented in the form of graphs or networks. It is applicable in numerous areas from computer network systems, to biology, to software ...
    • Systems biology graphical notation: process description language Level 1 Version 2.0 

      Rougny, A.; Touré, V.; Moodie, S.; Balaur, I.; Czauderna, T.; Borlinghaus, H.; Doğrusöz, Uğur; Mazein, A.; Dräger, A.; Blinov, M. L.; Villéger, A.; Haw, R.; Demir, E.; Mi, H.; Sorokin, A.; Schreiber, F.; Luna, A.; Doğrusöz, Uğur (De Gruyter, 2019)
      The Systems Biology Graphical Notation (SBGN) is an international community effort that aims to standardise the visualisation of pathways and networks for readers with diverse scientific backgrounds as well as to support ...