Now showing items 1-3 of 3

    • ChiBE: interactive visualization and manipulation of BioPAX pathway models 

      Babur, Özgün; Doğrusöz, Uğur; Demir, Emek; Sander, C. (Oxford University Press, 2010-02-01)
      SUMMARY: Representing models of cellular processes or pathways in a graphically rich form facilitates interpretation of biological observations and generation of new hypotheses. Solving biological problems using large ...
    • Discovering modulators of gene expression 

      Babur, Özgün; Demir, Emek; Gönen, M.; Sander, C.; Doğrusöz, Uğur (Oxford University Press, 2010-09-01)
      Proteins that modulate the activity of transcription factors, often called modulators, play a critical role in creating tissue- and context-specific gene expression responses to the signals cells receive. GEM (Gene Expression ...
    • VISIBIOweb: visualization and layout services for BioPAX pathway models 

      Dilek, Alptuğ; Belviranlı, Mehmet E.; Doğrusöz, Uğur (Oxford University Press, 2010-06-01)
      With recent advancements in techniques for cellular data acquisition, information on cellular processes has been increasing at a dramatic rate. Visualization is critical to analyzing and interpreting complex information; ...