Browsing Bilkent Center for Bioinformatics (BCBI) by Keywords "Computational biology"
Now showing items 1-4 of 4
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Algorithms for effective querying of compound graph-based pathway databases
(BioMed Central Ltd., 2009-11-16)Background: Graph-based pathway ontologies and databases are widely used to represent data about cellular processes. This representation makes it possible to programmatically integrate cellular networks and to investigate ... -
The BioPAX community standard for pathway data sharing
(Nature Publishing Group, 2010-09)Biological Pathway Exchange (BioPAX) is a standard language to represent biological pathways at the molecular and cellular level and to facilitate the exchange of pathway data. The rapid growth of the volume of pathway ... -
ChiBE: interactive visualization and manipulation of BioPAX pathway models
(Oxford University Press, 2010-02-01)SUMMARY: Representing models of cellular processes or pathways in a graphically rich form facilitates interpretation of biological observations and generation of new hypotheses. Solving biological problems using large ... -
PATIKAmad: putting microarray data into pathway context
(Wiley - V C H Verlag GmbH & Co. KGaA, 2008-06)High-throughput experiments, most significantly DNA microarrays, provide us with system-scale profiles. Connecting these data with existing biological networks poses a formidable challenge to uncover facts about a cell's ...