Now showing items 1-6 of 6
Discovering modulators of gene expression
(Oxford University Press, 2010-09-01)
Proteins that modulate the activity of transcription factors, often called modulators, play a critical role in creating tissue- and context-specific gene expression responses to the signals cells receive. GEM (Gene Expression ...
PATIKAmad: putting microarray data into pathway context
(Wiley - V C H Verlag GmbH & Co. KGaA, 2008-06)
High-throughput experiments, most significantly DNA microarrays, provide us with system-scale profiles. Connecting these data with existing biological networks poses a formidable challenge to uncover facts about a cell's ...
PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization
(Oxford University Press, 2006-02-01)
Summary: PATIKAweb provides a Web interface for retrieving and analyzing biological pathways in the PATIKA database, which contains data integrated from various prominent public pathway databases. It features a user-friendly ...
An ontology for collaborative construction and analysis of cellular pathways
(Oxford University Press, 2004-02-12)
Motivation: As the scientific curiosity in genome studies shifts toward identification of functions of the genomes in large scale, data produced about cellular processes at molecular level has been accumulating with an ...
The BioPAX community standard for pathway data sharing
(Nature Publishing Group, 2010-09)
Biological Pathway Exchange (BioPAX) is a standard language to represent biological pathways at the molecular and cellular level and to facilitate the exchange of pathway data. The rapid growth of the volume of pathway ...
PATIKA: an integrated visual environment for collaborative construction and analysis of cellular pathways
(Oxford University Press, 2002-06)
Motivation: Availability of the sequences of entire genomes shifts the scientific curiosity towards the identification of function of the genomes in large scale as in genome studies. In the near future, data produced about ...