Browsing by Author "Demir, Gülfem"
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Characterization of short tandem repeats using local assembly
Demir, Gülfem (Bilkent University, 2017-03)Tandem repeats are pieces of DNA where a pattern has multiple consecutive copies adjacent to itself. If the repeat unit (pattern) consists of 2 to 6 nucleotides, it can be referred to as a short tandem repeat or a ... -
Characterizing microsatellite polymorphisms using assembly-based and mapping-based tools
Demir, Gülfem; Alkan, Can (Scientific and Technical Research Council of Turkey, 2019)Microsatellite polymorphism has always been a challenge for genome assembly and sequence alignment due to sequencing errors, short read lengths, and high incidence of polymerase slippage in microsatellite regions. Despite ...